Gene
Gene Model ID | pfu_aug2.0_332.1_07371 |
---|---|
Locus | scaffold332.1 : 192740 ... 197643 : + |
To GenomeBrowser | scaffold332.1:192740..197643 |
Genes list of scaffold | scaffold332.1 |
Synonym | pfu_aug1.0_16.1_07277 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
integrase core domain protein | GO:0005488 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_332.1_07371.t1 | 1 | 1 | BTB_2 | 402 | 493 | 2.2e-10 | 40.5 | 1.4e-13 | 5.1e-10 | 39.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_332.1_07371.t1 | gi|339258032|ref|XP_003369202.1| | Pao retrotransposon peptidase family protein [Trichinella spiralis] | 5.0e-31 |
Transcript
Transcript ID | pfu_aug2.0_332.1_07371.t1 |
---|---|
Definition | - |
>pfu_aug2.0_332.1_07371.t1 atgttgggtatcctatccctggactatttcattgacgctttaccaaagtcggaaatgcgtctgagaattcgggaatctcg cccgaaaaacattatcgaggtcgaaaccttagccataaggttaaatacatatcaagatgcagaatcaagtacacgtaaca gcgcaccagtcaacgcaatacgagtcaacccaaaataccaggctgttttaccaaaatctttggtgaatgaagtacttatt ggtacccataacagcaaagctgggggccatttaggtataaaaaagaccatagccaaaattaaaaataaatatttctggca taaaatgtcaaaagacgtaaaggcttggtgtacaaactgtgacaaatgtgcagctcggaaagggcctcataaacagccta aagcacctcttcagaaatacttagtaggtgtaccattcgaacgtgtggctgtagatgtattaggaccattaccattaagt cataagaaaaattcttatttactagtcataggggactattttactaagtgggtggatgccatacccattacaaatcaaaa agaacatacaatagcacagaaaataattgatcgcaactgccgattcctcttgaccagacgggaccagaaacatgcttgta aagggggacatggctcaactagagatttggtgaagagaaccaccatgacgtgcacacccgaagagcttaaggaataccat cagctgattaaaaaacgacgagaccaggtggagcagtatatgttgacagtgaaaatcccgatgtctgatcaagggggaaa agaaggttcaggcattgacctacaactctcagacgaagaagacaacaacagaccgacagaggacacagaacaaactagga caccaacgccaacaacgcccattcttgtgacgctaacgacaaacgaggaacagaccagatttacgactcaggacgacatc aacgactttctgccagacgaaccagtgataacacgggcagtgacagtaacaagcagcttggacgaacatcagacagaaga agaccatgacaatgacaacacatcagtagagacgaaccacatgcaaccagaacccagtgcaaagggagatgcggatgaca gacctggaccatcaacaatcgtgacatcaacaactgcagccaagaagctgaaatacttggcagtatgccagaatcagcag attagtctttgtgtcagcggagttaatttttacactagtgcccagaccctacttggaagagagtcgaattcatttctggc acgcatgatgagaaagacctcacccctccagtcgtactacactgacaaaattttaacttattatgcaaatcgcaatcccg agtgttttaaatatattcttgactacttgttaaatggtgaaaagtgcacccttccagaaggactaattacactcaggaag atctttgttgaagctggtttctatgaactatgcgaactccagtccttgttggataggaaagttttgcgattcctacgtgg agaaaattga |
Protein
Protein ID | pfu_aug2.0_332.1_07371.t1 |
---|---|
Definition | - |
>pfu_aug2.0_332.1_07371.t1 MLGILSLDYFIDALPKSEMRLRIRESRPKNIIEVETLAIRLNTYQDAESSTRNSAPVNAIRVNPKYQAVLPKSLVNEVLI GTHNSKAGGHLGIKKTIAKIKNKYFWHKMSKDVKAWCTNCDKCAARKGPHKQPKAPLQKYLVGVPFERVAVDVLGPLPLS HKKNSYLLVIGDYFTKWVDAIPITNQKEHTIAQKIIDRNCRFLLTRRDQKHACKGGHGSTRDLVKRTTMTCTPEELKEYH QLIKKRRDQVEQYMLTVKIPMSDQGGKEGSGIDLQLSDEEDNNRPTEDTEQTRTPTPTTPILVTLTTNEEQTRFTTQDDI NDFLPDEPVITRAVTVTSSLDEHQTEEDHDNDNTSVETNHMQPEPSAKGDADDRPGPSTIVTSTTAAKKLKYLAVCQNQQ ISLCVSGVNFYTSAQTLLGRESNSFLARMMRKTSPLQSYYTDKILTYYANRNPECFKYILDYLLNGEKCTLPEGLITLRK IFVEAGFYELCELQSLLDRKVLRFLRGEN |