Gene
Gene Model ID | pfu_aug2.0_340.1_00631 |
---|---|
Locus | scaffold340.1 : 167997 ... 169775 : - |
To GenomeBrowser | scaffold340.1:167997..169775 |
Genes list of scaffold | scaffold340.1 |
Synonym | pfu_aug1.0_7.1_14637 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_340.1_00631.t1 | 1 | 1 | C1q | 63 | 185 | 1.9e-21 | 76.4 | 1.7e-25 | 2.5e-21 | 76.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_340.1_00631.t1 | gi|597779224|ref|XP_007253227.1| | PREDICTED: complement C1q-like protein 2-like [Astyanax mexicanus] | 2.0e-13 |
pfu_aug2.0_340.1_00631.t1 | gi|499009241|ref|XP_004556914.1| | PREDICTED: uncharacterized protein LOC101467498 [Maylandia zebra] | 1.0e-12 |
pfu_aug2.0_340.1_00631.t1 | gi|499051588|ref|XP_004576299.1| | 4.0e-12 | |
pfu_aug2.0_340.1_00631.t1 | gi|675878218|ref|XP_009024669.1| | hypothetical protein HELRODRAFT_193289 [Helobdella robusta] | 4.0e-12 |
pfu_aug2.0_340.1_00631.t1 | gi|597779433|ref|XP_007253324.1| | PREDICTED: complement C1q-like protein 4-like [Astyanax mexicanus] | 6.0e-12 |
Transcript
Transcript ID | pfu_aug2.0_340.1_00631.t1 |
---|---|
Definition | - |
>pfu_aug2.0_340.1_00631.t1 atgctgaatttactgttcctgagttatctcccattcctggtaatggttcatgggaaaacagagaaagacacagatgcatt aatacacgtcattctgagagagcaagcttctatgattaaacactgcatgtcaaatgtgtgcacacatcctaatagaccag agaagccatgggatagacaaatggttgctttcagtgcctatccagaaaatgagctcaagagcacttcagccaacacaaag atagtttttggaaaaactcgtacaaatattggtaatgcctacaatccgaccactggagttttcacagcaccaataactgg ggtctatgcttttcattggacaataatggttctgaatggaaaatattcaggcatctacattcaagtgaatgggaagaacc aagtttatctgtatggttatgctaaaggttatccaacttggtattccccaagtcagtcgtacgtaactgccctcaaaagg ggggatacagtaaaccttttatcaagcaattctttagggtatatctacccatactcaacatttactggatacagattgta a |
Protein
Protein ID | pfu_aug2.0_340.1_00631.t1 |
---|---|
Definition | - |
>pfu_aug2.0_340.1_00631.t1 MLNLLFLSYLPFLVMVHGKTEKDTDALIHVILREQASMIKHCMSNVCTHPNRPEKPWDRQMVAFSAYPENELKSTSANTK IVFGKTRTNIGNAYNPTTGVFTAPITGVYAFHWTIMVLNGKYSGIYIQVNGKNQVYLYGYAKGYPTWYSPSQSYVTALKR GDTVNLLSSNSLGYIYPYSTFTGYRL |