Gene
Gene Model ID | pfu_aug2.0_352.1_07399 |
---|---|
Locus | scaffold352.1 : 279144 ... 281257 : + |
To GenomeBrowser | scaffold352.1:279144..281257 |
Genes list of scaffold | scaffold352.1 |
Synonym | pfu_aug1.0_10072.1_10067 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_352.1_07399.t1 | 1 | 1 | Ank_5 | 60 | 104 | 4.1e-07 | 30.0 | 8.9e-11 | 6.6e-07 | 29.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_352.1_07399.t1 | gi|758872161|ref|WP_043033114.1| | MULTISPECIES: hypothetical protein [Burkholderia cepacia complex] | 3.0e-17 |
pfu_aug2.0_352.1_07399.t1 | gi|499324660|ref|WP_011015152.1| | ankyrin [Corynebacterium glutamicum] | 4.0e-15 |
pfu_aug2.0_352.1_07399.t1 | gi|748479924|ref|XP_011117340.1| | hypothetical protein AOL_s00004g389 [Arthrobotrys oligospora ATCC 24927] | 7.0e-15 |
pfu_aug2.0_352.1_07399.t1 | gi|748497735|ref|XP_011110003.1| | hypothetical protein H072_4043 [Dactylellina haptotyla CBS 200.50] | 2.0e-13 |
Transcript
Transcript ID | pfu_aug2.0_352.1_07399.t1 |
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Definition | - |
>pfu_aug2.0_352.1_07399.t1 atggaagactacccaattatcgtttttgccacacaattaagggatgatcacgttcagagtatcgagaatgttgccagatt agcagaacaacatcaatggcaagacttaatcaaagtattgagggacagatatgacctaataaacatgtgctcacttccta aagatcaatccgatttacctaacctcacattacttactcctcttcaccatgctgtaataggtaaagctcccaaagaagtg ttcgaagaactgttgaaattgcatgcatcaagaacttacaaaaacaaagaaggactgacggcttacgatataggaaaaag caacggcctggatgaagatatcttgaaaatgatagaaatacccgaggagattcgtaagcaagagattgaaatcaaaaaca tggaggaaggacttcacaaacttatacttgacagagttgagcatttgatacaggagactggtatacaactcccacagttg tcctatctgtttgagttcggtagttttctctaccatgttccgttgatgtacgggtcgttctcagtaaagaaagcaaagaa ggacaaaggaattatggttgaaagttggagcagaatagttggcggaagcggacagcgtcacagaataaacaagaaaggaa agatcaaactgaaagctgagggatttatgtga |
Protein
Protein ID | pfu_aug2.0_352.1_07399.t1 |
---|---|
Definition | - |
>pfu_aug2.0_352.1_07399.t1 MEDYPIIVFATQLRDDHVQSIENVARLAEQHQWQDLIKVLRDRYDLINMCSLPKDQSDLPNLTLLTPLHHAVIGKAPKEV FEELLKLHASRTYKNKEGLTAYDIGKSNGLDEDILKMIEIPEEIRKQEIEIKNMEEGLHKLILDRVEHLIQETGIQLPQL SYLFEFGSFLYHVPLMYGSFSVKKAKKDKGIMVESWSRIVGGSGQRHRINKKGKIKLKAEGFM |