Gene
Gene Model ID | pfu_aug2.0_363.1_10672 |
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Locus | scaffold363.1 : 220160 ... 229066 : + |
To GenomeBrowser | scaffold363.1:220160..229066 |
Genes list of scaffold | scaffold363.1 |
Synonym | pfu_aug1.0_4.1_57870 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_363.1_10672.t1 | 1 | 1 | RPE65 | 50 | 517 | 0.0 | 287.8 | 0.0 | 0.0 | 287.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_363.1_10672.t1 | gi|676483461|ref|XP_009063032.1| | hypothetical protein LOTGIDRAFT_167306 [Lottia gigantea] | 0.0 |
pfu_aug2.0_363.1_10672.t1 | gi|260831846|ref|XP_002610869.1| | hypothetical protein BRAFLDRAFT_94883 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_363.1_10672.t1 | gi|260830146|ref|XP_002610022.1| | hypothetical protein BRAFLDRAFT_99974 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_363.1_10672.t1 | gi|260813163|ref|XP_002601288.1| | hypothetical protein BRAFLDRAFT_81327 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_363.1_10672.t1 | gi|260831844|ref|XP_002610868.1| | hypothetical protein BRAFLDRAFT_94884 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_363.1_10672.t1 |
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Definition | - |
>pfu_aug2.0_363.1_10672.t1 atggtaaatattcgaagacaacgtgtattttgctggttcatttttatcatttttacggatatttgtataggagatgattc accaggttttgatatattttatggaacttcaaatttagaggaaaaagaggatcaccccatcaaatttgagaatccacttc cagattggcttaaaggaactctgattcggaacagtcctgggcgcttcgaagttggaaagagaaacttcacgaatttgttt gacggttttgctaaaggtctgagctggaagtttcaaggaaatggacaagctttattttctgccaagttccttcggacgga ctcatacaatgcgtcgatggagaaaaacgatatcgcagaatatctgacaatcggagcagtgcagccgccattttctattg agcagaagatcaaggccatagctaacaatatggataatccggtcgtcaatatttataatttttcctctgacttggtcgtt ttgaatgatatttggacggtgtataccatcaatgaaaagacgctcgatctagcagagaaaattctggctgaactttccgg tgttcatataggatttccttacataagtcatatgtcaagtgcgcatcctctaccggaaccaggaaccggaaatcatatct catttattggaagcgtgtcggttttgccgggtttgaagcatattctacatgttgtgcgagtgaaatccgcacacgagagg gaacttattacaagtatccatttagataagatgccctacatccattcgttttccgtcacaaaaaaatatataatgatgat cggaagcccatattattttgacgtagaccaaatgatagaaaaactgagtgttggctctgcaatgaaatgggaaaaagggg aacctgcaatcatctatgttattgatctcacaaatggctcaacacagtcatttaaaacagagaccatgttttcgatgcat catatcaacgctttcgaaatagacaacaatcgtttggccatggatgtcgtagcatacagtgaagcgaactccttcagtgc tatgtcactggagtacctgagaaacgaaactcaaagaaatgaatttacttcaccttcacaaatacggaggtacacagtcg atttaaggtctggaattgttaacattactacatttcagaatttttctatccagcctcgggcatcacagatcgagcttccg acaataaacgaaaattaccgatttcgaaagtactgctatgtgtattccgtgatgtataaagccgacaataagagctacag caacatggcgataatgaagaaagacctatgtcacgtgggtagtaaatcacgtgacaaaatatggtgcgccaaacatcact acttgaatgaggcgtggtttgtaccaaaccctgtcgctacagaggaagacgatggggtgctggtgtttccagtctttgac ggcgtaaacaagacttcgtatttggcaatgctcgatgctaacactatgaaattagtaaacagagcctatatgcctacatt agtaccgttcactttccatggaagatttttttattcgtag |
Protein
Protein ID | pfu_aug2.0_363.1_10672.t1 |
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Definition | - |
>pfu_aug2.0_363.1_10672.t1 MVNIRRQRVFCWFIFIIFTDICIGDDSPGFDIFYGTSNLEEKEDHPIKFENPLPDWLKGTLIRNSPGRFEVGKRNFTNLF DGFAKGLSWKFQGNGQALFSAKFLRTDSYNASMEKNDIAEYLTIGAVQPPFSIEQKIKAIANNMDNPVVNIYNFSSDLVV LNDIWTVYTINEKTLDLAEKILAELSGVHIGFPYISHMSSAHPLPEPGTGNHISFIGSVSVLPGLKHILHVVRVKSAHER ELITSIHLDKMPYIHSFSVTKKYIMMIGSPYYFDVDQMIEKLSVGSAMKWEKGEPAIIYVIDLTNGSTQSFKTETMFSMH HINAFEIDNNRLAMDVVAYSEANSFSAMSLEYLRNETQRNEFTSPSQIRRYTVDLRSGIVNITTFQNFSIQPRASQIELP TINENYRFRKYCYVYSVMYKADNKSYSNMAIMKKDLCHVGSKSRDKIWCAKHHYLNEAWFVPNPVATEEDDGVLVFPVFD GVNKTSYLAMLDANTMKLVNRAYMPTLVPFTFHGRFFYS |