Gene
Gene Model ID | pfu_aug2.0_3829.1_32562 |
---|---|
Locus | scaffold3829.1 : 16323 ... 32415 : - |
To GenomeBrowser | scaffold3829.1:16323..32415 |
Genes list of scaffold | scaffold3829.1 |
Synonym | pfu_aug1.0_2055.1_15694 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_3829.1_32562.t1 | 2 | 1 | C1q | 86 | 168 | 6.0e-32 | 110.3 | 1.2e-11 | 8.7e-08 | 32.2 |
pfu_aug2.0_3829.1_32562.t1 | 2 | 2 | C1q | 208 | 336 | 6.0e-32 | 110.3 | 3.2e-25 | 2.4e-21 | 76.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_3829.1_32562.t1 | gi|617420111|ref|XP_007558206.1| | PREDICTED: complement C1q-like protein 2 isoform X1 [Poecilia formosa] | 4.0e-13 |
pfu_aug2.0_3829.1_32562.t1 | gi|658864856|ref|XP_008415268.1| | PREDICTED: complement C1q-like protein 2 [Poecilia reticulata] | 4.0e-12 |
Transcript
Transcript ID | pfu_aug2.0_3829.1_32562.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3829.1_32562.t1 atgaagtcaattaatgtattgattttaatcataacaactttgcttattactgaatcattggaaacaagtctctcggatcg tgacataataaaaagattggaggctttggaaaatgaacagatattgttgcgagagggtatacagaaacaaaagaggaaaa acgaagagcttctaaaccttcttgaaggcgatgtcgacattcagaagaggctctttctagatggtcttgacaatgggacc attgttaaacaccccatggaaacaaacgttggagatggatataacagtaccacgggatactttgtaatacctcacgcggg aaactacgaatttattcttacgcttatgtcacgctccggtaatatctacgatgctaagattatgagagataatacgacag aactatgtcgtacgcatgctgcttcacagaaccaggctatgggcgcatgtgtaacaatggtgaagcttcctgttggagca acagtttcagcatcgtcagataatagtagtgctgaaaagctactcgaacttgagaaaaaggtaaacattctcgcaaagcg cttagaacattgcgagggaaaggccgtccaaagaaaggttcgagatgtggatcccgtcatagcgttttctgcagctatta cttcaaacgttagccctgtggcaccatctgagattatagtctacgatcatgtacacatcaaccaaggtaacgcatatgat ccaaacgtcggcgggttcaaagccaccgtaaatggaatttaccactttgctgccacgattatgtcgtattcaagtaacta cattgagatagaactggttcattccacacccaacggttctcctacggttctttgtcgagcacgagcctctcaaagctata atgctatgggaacatgcattgttaacgtgcgacttgcagtaggtgatgatgtctgggtgcggcactattcctcacagggt acttatatctacggatatttattcccaacattttctggtcatttgatttatgcagaataa |
Protein
Protein ID | pfu_aug2.0_3829.1_32562.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3829.1_32562.t1 MKSINVLILIITTLLITESLETSLSDRDIIKRLEALENEQILLREGIQKQKRKNEELLNLLEGDVDIQKRLFLDGLDNGT IVKHPMETNVGDGYNSTTGYFVIPHAGNYEFILTLMSRSGNIYDAKIMRDNTTELCRTHAASQNQAMGACVTMVKLPVGA TVSASSDNSSAEKLLELEKKVNILAKRLEHCEGKAVQRKVRDVDPVIAFSAAITSNVSPVAPSEIIVYDHVHINQGNAYD PNVGGFKATVNGIYHFAATIMSYSSNYIEIELVHSTPNGSPTVLCRARASQSYNAMGTCIVNVRLAVGDDVWVRHYSSQG TYIYGYLFPTFSGHLIYAE |