Gene
Gene Model ID | pfu_aug2.0_4.1_13357 |
---|---|
Locus | scaffold4.1 : 810102 ... 814802 : - |
To GenomeBrowser | scaffold4.1:810102..814802 |
Genes list of scaffold | scaffold4.1 |
Synonym | pfu_aug1.0_108.1_50633 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_4.1_13357.t1 | 1 | 1 | FAM183 | 16 | 120 | 2.0e-35 | 121.6 | 3.3e-39 | 2.4e-35 | 121.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_4.1_13357.t1 | gi|676429694|ref|XP_009045684.1| | hypothetical protein LOTGIDRAFT_237600 [Lottia gigantea] | 0.0 |
pfu_aug2.0_4.1_13357.t1 | gi|524911728|ref|XP_005110724.1| | PREDICTED: protein FAM183A-like [Aplysia californica] | 0.0 |
pfu_aug2.0_4.1_13357.t1 | gi|291234482|ref|XP_002737174.1| | PREDICTED: protein FAM183B-like [Saccoglossus kowalevskii] | 0.0 |
pfu_aug2.0_4.1_13357.t1 | gi|699244489|ref|XP_002127995.2| | PREDICTED: protein FAM183A-like isoform X1 [Ciona intestinalis] | 0.0 |
pfu_aug2.0_4.1_13357.t1 | gi|260817997|ref|XP_002603871.1| | hypothetical protein BRAFLDRAFT_261551 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_4.1_13357.t1 |
---|---|
Definition | - |
>pfu_aug2.0_4.1_13357.t1 atggcaaaacaagagaaggaaccccttaattttgttcaccaaaatgcaattttatgcgaaacaattacaaaggaacaacg acatcaaaaattgtacacaaattacagtgtaaatccattcaaaaaaatacatgtgatcacaggaaaaccaaactccaaac acgatacagaagaaggggaagaagatagtcatttcaaaaatgttattaagcgtgccaatcaagaacctgttaagaagtat gtgtatccccagacagaggctcaggaagtgggatggataaccaaaccattgattgatatagaccgttcagatagacgcct gcatttcttcagacagaatactcccatcacaaaatacatggatgccgcatggagggtgaaagaacaaacggaaaatatga actaa |
Protein
Protein ID | pfu_aug2.0_4.1_13357.t1 |
---|---|
Definition | - |
>pfu_aug2.0_4.1_13357.t1 MAKQEKEPLNFVHQNAILCETITKEQRHQKLYTNYSVNPFKKIHVITGKPNSKHDTEEGEEDSHFKNVIKRANQEPVKKY VYPQTEAQEVGWITKPLIDIDRSDRRLHFFRQNTPITKYMDAAWRVKEQTENMN |