Gene
Gene Model ID | pfu_aug2.0_48.1_26748 |
---|---|
Locus | scaffold48.1 : 453146 ... 473447 : + |
To GenomeBrowser | scaffold48.1:453146..473447 |
Genes list of scaffold | scaffold48.1 |
Synonym | pfu_aug1.0_622.1_36612 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_48.1_26748.t1 | 2 | 1 | FGF | 51 | 170 | 2.2e-20 | 72.6 | 1.5e-24 | 2.2e-20 | 72.6 |
pfu_aug2.0_48.1_26748.t1 | 2 | 2 | FGF | 223 | 227 | 2.2e-20 | 72.6 | 1.0 | 15000.0 | -5.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_48.1_26748.t1 | gi|542174230|ref|XP_005467709.1| | PREDICTED: fibroblast growth factor 18-like isoform X3 [Oreochromis niloticus] | 1.0e-10 |
pfu_aug2.0_48.1_26748.t1 | gi|556998688|ref|XP_006002502.1| | PREDICTED: fibroblast growth factor 18 [Latimeria chalumnae] | 2.0e-10 |
pfu_aug2.0_48.1_26748.t1 | gi|657557118|ref|XP_008282784.1| | PREDICTED: fibroblast growth factor 18-like isoform X2 [Stegastes partitus] | 8.0e-10 |
pfu_aug2.0_48.1_26748.t1 | gi|597731370|ref|XP_007228059.1| | PREDICTED: fibroblast growth factor 18-like isoform X2 [Astyanax mexicanus] | 1.0e-09 |
pfu_aug2.0_48.1_26748.t1 | gi|284005094|ref|NP_001164697.1| | fibroblast growth factor 8/17/18 precursor [Saccoglossus kowalevskii] | 1.0e-09 |
Transcript
Transcript ID | pfu_aug2.0_48.1_26748.t1 |
---|---|
Definition | - |
>pfu_aug2.0_48.1_26748.t1 atgaggcattatttttctcatattagttgtatatgcaggttgtcgacgctgctgctcatagttctggtgaattcagtgga cgctaaggatttcacgccgaagttttttgataatagtagtttgaagtaccccaccggagaaagccttacacgtagataca tgttgtggaaccggtgttcccagcgattcgtgcgcatcaagtcgccgaggaagatagacgccagaggaagaaataaatcc cgattcgctgaagtagccattacgtcagtagggccggacgtagtgaccattcaaggggtgaaatctaccctgtacctctg cttcaacaagaagggcagacttcgaggcaaggcctcacctagaaaacatagatgtcacttttcccaaaatctgactgcag atggatatgtgaattttcatcttaaaagtgcaactgaccctaagttgttcattggatttagaaacaatgggaaatcatta cctgggtataaaaagataacaaataccaggatggaaaggtgttttgacttaagtttacgtgaattaaatcctaagaaagt ggaaggacctttcgacttcaatactttacctctctcatatgacccagaagaacaagagacattctcaacgaaaaggagaa tgcgtaaaatacgtcactaccggaagcggaggcggcatagaaatagaaggaaaagacggaggcagcagagaacaatagat aggtga |
Protein
Protein ID | pfu_aug2.0_48.1_26748.t1 |
---|---|
Definition | - |
>pfu_aug2.0_48.1_26748.t1 MRHYFSHISCICRLSTLLLIVLVNSVDAKDFTPKFFDNSSLKYPTGESLTRRYMLWNRCSQRFVRIKSPRKIDARGRNKS RFAEVAITSVGPDVVTIQGVKSTLYLCFNKKGRLRGKASPRKHRCHFSQNLTADGYVNFHLKSATDPKLFIGFRNNGKSL PGYKKITNTRMERCFDLSLRELNPKKVEGPFDFNTLPLSYDPEEQETFSTKRRMRKIRHYRKRRRHRNRRKRRRQQRTID R |