Gene
Gene Model ID | pfu_aug2.0_486.1_20832 |
---|---|
Locus | scaffold486.1 : 209405 ... 231036 : + |
To GenomeBrowser | scaffold486.1:209405..231036 |
Genes list of scaffold | scaffold486.1 |
Synonym | pfu_aug1.0_6.1_57879 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
cholinergic alpha polypeptide 6 | GO:0005230 GO:0005261 GO:0005488 GO:0014059 GO:0016021 GO:0044459 GO:0065008 GO:0098655 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_486.1_20832.t1 | 1 | 1 | Neur_chan_LBD | 26 | 229 | 0.0 | 171.3 | 0.0 | 0.0 | 170.7 |
pfu_aug2.0_486.1_20832.t1 | 1 | 1 | Neur_chan_memb | 236 | 453 | 3.8e-27 | 95.7 | 1.1e-30 | 7.9e-27 | 94.6 |
Transcript
Transcript ID | pfu_aug2.0_486.1_20832.t1 |
---|---|
Definition | - |
>pfu_aug2.0_486.1_20832.t1 atgaggtcggcactcattcatttatcagttttagctgtatttttcctaagaacagatgctgagttcttggacacattcgt gacggcactgtttgcagattacgagaaggatatccgaccttactgtatggacaacggaacatcgatccccactaacgtcc acatggatttgtccttaagacagataattgatttggatgagccacaacagatgttgaaaataaatgtttggatacgactg acttggtgggattgtagactggtctggaacgacacaggaagcttcgccgttgatacaattatggtacctgaaacaagggt ctggattccagatctgacactctatgacaatgctgcatctacccttcctggtcttaaagactatgtagcaacggtaaaag acaatggtgatgtaaagtacaattttccatctgttataaacagcatgtgtgccatagacgtacgttacttcccctttgat tatcagagttgttctttagagtttggatcttgggcgtctccagggagtggtatcaacatatctgctctcaaaacatcggt tgatatggacaattacatagaaaacattgagtggtccgttatcagcactaaagctatcagaaaagaaaaacagtatgaag agacctacccgtcaattatcttcactctatcactcagacggaagcctttattctacatgatgaatatgattttcccgtgt ttgctgattacttttgttgccgtgttcggttttatgctaccgccagactctggagagaaagtaaatttggaggtcacagt cttgttgtcgctggccgtttttcagctgattgtcttggacttgatacctgcatccggggattctacccctttcataggta tttatttcatgacttccatggtactagtaggcatgtcctgcctgatgacagtgatagtattacagatccacttccgaggc tgcaatagccgccaaatatcaccctggatatacaagcggattatgataccattggcaaaaataacctttgtgcaattaca accagatacattgttagacagacaacagagtctcataacaaggaaaatgtccatccgtccaaacaaaatctacatgaatg gtacgtcatcagatacgtttgtagaacactctgagagacatcctttccttcccgatatgaaagaaataatttcattggtc aacaaaataacagcaaacgtggacgccattacacaagttgtatgtgactcggacgaaggtgacgtcataaagttgcaatg gagtattctcgccaccatttttgacagattatttcttgcagtttatatcactgtctcagtaattacaacactgtccatat tattacaatttcaaggagctcagtga |
Protein
Protein ID | pfu_aug2.0_486.1_20832.t1 |
---|---|
Definition | - |
>pfu_aug2.0_486.1_20832.t1 MRSALIHLSVLAVFFLRTDAEFLDTFVTALFADYEKDIRPYCMDNGTSIPTNVHMDLSLRQIIDLDEPQQMLKINVWIRL TWWDCRLVWNDTGSFAVDTIMVPETRVWIPDLTLYDNAASTLPGLKDYVATVKDNGDVKYNFPSVINSMCAIDVRYFPFD YQSCSLEFGSWASPGSGINISALKTSVDMDNYIENIEWSVISTKAIRKEKQYEETYPSIIFTLSLRRKPLFYMMNMIFPC LLITFVAVFGFMLPPDSGEKVNLEVTVLLSLAVFQLIVLDLIPASGDSTPFIGIYFMTSMVLVGMSCLMTVIVLQIHFRG CNSRQISPWIYKRIMIPLAKITFVQLQPDTLLDRQQSLITRKMSIRPNKIYMNGTSSDTFVEHSERHPFLPDMKEIISLV NKITANVDAITQVVCDSDEGDVIKLQWSILATIFDRLFLAVYITVSVITTLSILLQFQGAQ |