Gene
Gene Model ID | pfu_aug2.0_5137.1_26036 |
---|---|
Locus | scaffold5137.1 : 806 ... 3317 : + |
To GenomeBrowser | scaffold5137.1:806..3317 |
Genes list of scaffold | scaffold5137.1 |
Synonym | pfu_aug1.0_20054.1_61964 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_5137.1_26036.t1 | 1 | 1 | C1q | 77 | 210 | 6.1e-19 | 68.2 | 9.7e-21 | 1.4e-16 | 60.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_5137.1_26036.t1 | gi|742154175|ref|XP_010881428.1| | PREDICTED: EMILIN-1-like isoform X1 [Esox lucius] | 1.0e-08 |
pfu_aug2.0_5137.1_26036.t1 | gi|556960050|ref|XP_005990614.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9A [Latimeria chalumnae] | 5.0e-08 |
pfu_aug2.0_5137.1_26036.t1 | gi|683899755|ref|XP_009083863.1| | PREDICTED: complement C1q and tumor necrosis factor-related protein 9A-like [Serinus canaria] | 5.0e-07 |
pfu_aug2.0_5137.1_26036.t1 | gi|507714859|ref|XP_004648455.1| | PREDICTED: multimerin-1 [Octodon degus] | 6.0e-07 |
Transcript
Transcript ID | pfu_aug2.0_5137.1_26036.t1 |
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Definition | - |
>pfu_aug2.0_5137.1_26036.t1 atggtgcagagagtactgtacagtgtgacatggaaacggacgtcagaatgtggacggcggcggagggtagacggtaagtg taggacaatctttagtggattatacaacatcactgtaaatggtatagagcgtaatgtacagtttgacatggaaacaggtg gcggagggtggacgaagcgaatcggcttcaccactggaatgaactctactaattcatggtggtcctctggtaaacttata ttcaacaaagttatcttcaaccaaggcactgtttataacctcacatccggggtatttactgctccctctagcggcgtcta tgtcttctatgtttcaattacttcatatgacgacaacgacatcaaagtggacataactctaaacggaactcctctaacca cggcttggggtaatggacatagggagagtcaaacgtaccaaaggcagagacagggttgctgtagggtgaataatagttac agcaactacttctataatcgttacaagacgggaacaaacatggcaatttcttcctttaaggtcggtgacgaagtttgggt gcagtacagatctggaaatggcttcagtagcagtggtgtccctataacaactttctcgggctttgtgatttga |
Protein
Protein ID | pfu_aug2.0_5137.1_26036.t1 |
---|---|
Definition | - |
>pfu_aug2.0_5137.1_26036.t1 MVQRVLYSVTWKRTSECGRRRRVDGKCRTIFSGLYNITVNGIERNVQFDMETGGGGWTKRIGFTTGMNSTNSWWSSGKLI FNKVIFNQGTVYNLTSGVFTAPSSGVYVFYVSITSYDDNDIKVDITLNGTPLTTAWGNGHRESQTYQRQRQGCCRVNNSY SNYFYNRYKTGTNMAISSFKVGDEVWVQYRSGNGFSSSGVPITTFSGFVI |