Gene
Gene Model ID | pfu_aug2.0_528.1_27509 |
---|---|
Locus | scaffold528.1 : 237355 ... 239079 : + |
To GenomeBrowser | scaffold528.1:237355..239079 |
Genes list of scaffold | scaffold528.1 |
Synonym | pfu_aug1.0_5662.1_23858 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_528.1_27509.t1 | 1 | 1 | Fork_head | 80 | 172 | 4.1e-38 | 129.3 | 5.70048e-42 | 8.4e-38 | 128.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_528.1_27509.t1 | gi|524899057|ref|XP_005105969.1| | PREDICTED: forkhead box protein F1-like [Aplysia californica] | 0.0 |
pfu_aug2.0_528.1_27509.t1 | gi|260798592|ref|XP_002594284.1| | hypothetical protein BRAFLDRAFT_65139 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_528.1_27509.t1 | gi|573893546|ref|XP_006634525.1| | PREDICTED: forkhead box protein F2-like [Lepisosteus oculatus] | 0.0 |
pfu_aug2.0_528.1_27509.t1 | gi|548337577|ref|XP_005721471.1| | PREDICTED: forkhead box protein F2-like [Pundamilia nyererei] | 0.0 |
pfu_aug2.0_528.1_27509.t1 | gi|583982375|ref|XP_006786484.1| | PREDICTED: forkhead box protein F2-like [Neolamprologus brichardi] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_528.1_27509.t1 |
---|---|
Definition | - |
>pfu_aug2.0_528.1_27509.t1 atggtgtcggttcaagacgtgaaaccgatgactaccgagttagagctattgcaggatgttgaaaggaaagttgttccaaa atctgagccaggattttctgatgaaagtgcagcatcagacgatgatgacgaggaatcagccgaggactcgcagacgacac ctcagccaaatccggaatcgccaacaacaggacagaaaaatccaaagaaatctggagttggtgtgagaaggcaggagaag ccaccctattcttatattgccctcatcgtcatggcaattcaggctacacccaacaaaagatgcaccctcagtgaaattta tcagtttctgcagcagagatttccgtttttccggggatcgtaccaaggatggaagaactcagtgcggcacaacctctcct taaacgagtgctttattaaattaccaaaaggacttggaaggccgggaaaaggacactattggaccattgatccggctgca gaattcatgttcgaggagggatctttccgcagacgaccgcgtggtttccggcggaaatgtcaggcattaaagcccttcgg aatgctcgggatcaatggtatgggaagtggacagtcgatgatcggatctcattatgacttgttccaaaatacaaatatgt cgtctatgaatatgcagtgctccgggaacaccacacaaacctacgacaacacgggaatgatgcagcagaactcaaccctc caccactctaacttttcaccgatgcctcaacacaatcagaatttgaattgcagttttaacatgacaatgaatggtcgata tggaccaagctgtgctttatcaggactagagggtgactacgtacagtcccccgcaccaaacactttacctgtgtacgata gagaccattattggtccgctcaaagatactcaaatatgacaaaacaacagacattgagtccggcagggagtacgggatcg attccgagcatttcaccagcaagttccggcgaccactctccttacgggtccaatattgtgacgacctcagaaccaatgga cttagctttagctggtgggtacactttttaa |
Protein
Protein ID | pfu_aug2.0_528.1_27509.t1 |
---|---|
Definition | - |
>pfu_aug2.0_528.1_27509.t1 MVSVQDVKPMTTELELLQDVERKVVPKSEPGFSDESAASDDDDEESAEDSQTTPQPNPESPTTGQKNPKKSGVGVRRQEK PPYSYIALIVMAIQATPNKRCTLSEIYQFLQQRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAA EFMFEEGSFRRRPRGFRRKCQALKPFGMLGINGMGSGQSMIGSHYDLFQNTNMSSMNMQCSGNTTQTYDNTGMMQQNSTL HHSNFSPMPQHNQNLNCSFNMTMNGRYGPSCALSGLEGDYVQSPAPNTLPVYDRDHYWSAQRYSNMTKQQTLSPAGSTGS IPSISPASSGDHSPYGSNIVTTSEPMDLALAGGYTF |