Gene
Gene Model ID | pfu_aug2.0_6085.1_19489 |
---|---|
Locus | scaffold6085.1 : 3516 ... 7289 : + |
To GenomeBrowser | scaffold6085.1:3516..7289 |
Genes list of scaffold | scaffold6085.1 |
Synonym | pfu_aug1.0_4365.1_37860 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_6085.1_19489.t1 | 2 | 1 | 7TM_GPCR_Srsx | 45 | 85 | 8.4e-08 | 31.6 | 1.0e-07 | 0.00075 | 18.7 |
pfu_aug2.0_6085.1_19489.t1 | 2 | 1 | 7tm_1 | 51 | 131 | 4.8e-19 | 68.5 | 3.8e-14 | 2.8e-10 | 39.7 |
pfu_aug2.0_6085.1_19489.t1 | 2 | 2 | 7tm_1 | 128 | 215 | 4.8e-19 | 68.5 | 9.1e-13 | 6.8e-09 | 35.2 |
pfu_aug2.0_6085.1_19489.t1 | 2 | 2 | 7TM_GPCR_Srsx | 129 | 228 | 8.4e-08 | 31.6 | 7.8e-07 | 0.0058 | 15.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_6085.1_19489.t1 | gi|524868085|ref|XP_005090849.1| | PREDICTED: melatonin-related receptor-like [Aplysia californica] | 5.0e-30 |
pfu_aug2.0_6085.1_19489.t1 | gi|72008629|ref|XP_785137.1| | PREDICTED: melatonin receptor type 1A-like [Strongylocentrotus purpuratus] | 2.0e-10 |
Transcript
Transcript ID | pfu_aug2.0_6085.1_19489.t1 |
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Definition | - |
>pfu_aug2.0_6085.1_19489.t1 atgaattattcaactgaacgaaatttccagttagaaggacatgggtcttccgagatcgtttttgggcgtcatcagttcct gatagagacccccgctattgcagtccctggacttgttatactggtgctggcttcagttgtaggaacattcggaaatttac ttatcttattttccctgtgtacaacaaaatctttgcaaaccatagaggctattttcatcgcaaatttggcaatatccgac atgtacgttacagtattagcagatcccatgagcattgtcgcaaaacttgaaggcgaggagttctttgatatggttccagg actatgtcgggctatagcttatggctgtaccatatcctgtgtgaattccctatgcaccattgcttggttttcgtacctta acatttacatagccgttcgcagaagtgatagacgagtaagtagagcaatcaccatccaaaagaaagggaaaagatcgacg agtctggctaaaactctgttcataatttatgcagtattcgcaacttgctggatcccttatgccctcattatcgttgtcga ccgacacaatagcttttcccacattgcccatgtttacgtcaccatgtttgcacacttgcatccttctatcaactggcttg tgtactatgcgaccaataagaaatttaaggaagcatttgacaggattgcacacttgaataaatgcttctgtaggtgtgtc caaggacagagagaggaaagtgggtcatcttctggagtctcttcaacttccggaacacttaataccttggcaaaagcttc tacagaatcggctttttga |
Protein
Protein ID | pfu_aug2.0_6085.1_19489.t1 |
---|---|
Definition | - |
>pfu_aug2.0_6085.1_19489.t1 MNYSTERNFQLEGHGSSEIVFGRHQFLIETPAIAVPGLVILVLASVVGTFGNLLILFSLCTTKSLQTIEAIFIANLAISD MYVTVLADPMSIVAKLEGEEFFDMVPGLCRAIAYGCTISCVNSLCTIAWFSYLNIYIAVRRSDRRVSRAITIQKKGKRST SLAKTLFIIYAVFATCWIPYALIIVVDRHNSFSHIAHVYVTMFAHLHPSINWLVYYATNKKFKEAFDRIAHLNKCFCRCV QGQREESGSSSGVSSTSGTLNTLAKASTESAF |