Gene
Gene Model ID | pfu_aug2.0_7288.1_29567 |
---|---|
Locus | scaffold7288.1 : 4 ... 8795 : + |
To GenomeBrowser | scaffold7288.1:4..8795 |
Genes list of scaffold | scaffold7288.1 |
Synonym | pfu_aug1.0_2402.1_66310 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_7288.1_29567.t1 | 3 | 1 | HYR | 185 | 198 | 1.8e-13 | 50.2 | 0.32 | 4800.0 | -2.4 |
pfu_aug2.0_7288.1_29567.t1 | 3 | 2 | HYR | 256 | 270 | 1.8e-13 | 50.2 | 0.0045 | 66.0 | 3.6 |
pfu_aug2.0_7288.1_29567.t1 | 3 | 3 | HYR | 272 | 348 | 1.8e-13 | 50.2 | 1.2e-15 | 1.8e-11 | 43.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_7288.1_29567.t1 | gi|390361783|ref|XP_782582.3| | 1.0e-09 | |
pfu_aug2.0_7288.1_29567.t1 | gi|449676197|ref|XP_002162576.2| | 2.0e-08 |
Transcript
Transcript ID | pfu_aug2.0_7288.1_29567.t1 |
---|---|
Definition | - |
>pfu_aug2.0_7288.1_29567.t1 atgatcgtcatttgtggtccatggggtctacaaatcttcaggtatcgactgaacgctatcacactcaaaacgaaggcgga aattgacgtcataaaccacatcatgaaccatgatgcacggcacaaaaggtccgacggaaatgctaatgaatatgtatttt caaaaattgaatacacacatatgaccacacaagcagttatatcggccacagctaagacggatttaccaagttgtgatggt ctaccgtacaactcaaatccgagtctttgtgagtatataggttgtaggactaactctgactgcacgtcagcagaggtctg ctgttctaggaatgggacctcccaatgtcacaccacagtccgattctacttccagaattgcctctacaacggcaaatatt acgatgtcggttccgtctttgtcggtaataacggagtttattgccgttgtggtcaaggtatactgcatggagaaattata tgtagtgccaccgtgaagtctaaacatgctgatatatgtaaggcacctgatgacagtcaccatccaaatactacacaaga accttacattgggaactgtcctaatgctgatcagtcggtgatagtgcgcattcaggaggataagaacatagggtacctga cacatcaattccatgtaaccgactggcacggcagggttttggcgtacttagtcattcaggaaatttaccatatatgtaac tgtacgcatcaacctctctatgaaaacatggccatatcagaacctgatgaatatggtaataaagctgtttgctgttttaa agtcattgtagaagatatatatcctcctgtttttcgtacttgtccggagaatagaatggtcagcagtggtcagtctgttt cttggatacagccacacgtttgggacaatgtaggggtcaagaatttgaccatgacacccaaaattaaaagtggtgcagtg tggcgtccagggatatacatggtggaatacgcagccgtggactggtccggtaacagggcgtattgtcaatttagtgtcac agtattagcctcctctataatcagcattatggcaatagcagtgttggttgttggagcactcaccattagaaaatgtcgcc aaggaagtcgtctgcaagcaaacaacagttttctcagcagactccgagctgaaagaattcgacgtggacatagtttcgga tctggcggtaatgacaacgcggtatttactgtttacgactctgagccaccaccgtatgatattgccgtcagagataaatt accggactatatttcctcagattctcctccgccatatgaaagcacatcaagcgatgaacaaaccggaagttcaacaatat ctggtatcgcatcgaacgcgactgtttgtgataattctcaaagtgaatatacattacgaaatgatggtgcatctcagacc gaaaacgctcaaaattcaaacagaagttcgattgttaacgttgtcaatccagattctatccatacggttgtgtaa |
Protein
Protein ID | pfu_aug2.0_7288.1_29567.t1 |
---|---|
Definition | - |
>pfu_aug2.0_7288.1_29567.t1 MIVICGPWGLQIFRYRLNAITLKTKAEIDVINHIMNHDARHKRSDGNANEYVFSKIEYTHMTTQAVISATAKTDLPSCDG LPYNSNPSLCEYIGCRTNSDCTSAEVCCSRNGTSQCHTTVRFYFQNCLYNGKYYDVGSVFVGNNGVYCRCGQGILHGEII CSATVKSKHADICKAPDDSHHPNTTQEPYIGNCPNADQSVIVRIQEDKNIGYLTHQFHVTDWHGRVLAYLVIQEIYHICN CTHQPLYENMAISEPDEYGNKAVCCFKVIVEDIYPPVFRTCPENRMVSSGQSVSWIQPHVWDNVGVKNLTMTPKIKSGAV WRPGIYMVEYAAVDWSGNRAYCQFSVTVLASSIISIMAIAVLVVGALTIRKCRQGSRLQANNSFLSRLRAERIRRGHSFG SGGNDNAVFTVYDSEPPPYDIAVRDKLPDYISSDSPPPYESTSSDEQTGSSTISGIASNATVCDNSQSEYTLRNDGASQT ENAQNSNRSSIVNVVNPDSIHTVV |