Gene
Gene Model ID | pfu_aug2.0_787.1_24406 |
---|---|
Locus | scaffold787.1 : 116194 ... 127885 : - |
To GenomeBrowser | scaffold787.1:116194..127885 |
Genes list of scaffold | scaffold787.1 |
Synonym | pfu_aug1.0_974.1_22395 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
growth hormone secretagogue receptor type 1-like isoform x1 | GO:0004930 GO:0007165 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_787.1_24406.t1 | 2 | 1 | 7TM_GPCR_Srsx | 47 | 268 | 1.1e-08 | 34.6 | 3.6e-12 | 1.1e-08 | 34.6 |
pfu_aug2.0_787.1_24406.t1 | 2 | 1 | 7tm_1 | 53 | 315 | 0.0 | 232.0 | 1.4013e-45 | 4.79945e-42 | 143.8 |
pfu_aug2.0_787.1_24406.t1 | 2 | 2 | 7tm_1 | 336 | 542 | 0.0 | 232.0 | 2.6e-30 | 7.7e-27 | 94.0 |
pfu_aug2.0_787.1_24406.t1 | 2 | 2 | 7TM_GPCR_Srsx | 337 | 500 | 1.1e-08 | 34.6 | 0.12 | 370.0 | 0.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_787.1_24406.t1 | gi|340715799|ref|XP_003396396.1| | PREDICTED: LOW QUALITY PROTEIN: growth hormone secretagogue receptor type 1 [Bombus terrestris] | 1.96182e-44 |
pfu_aug2.0_787.1_24406.t1 | gi|390177258|ref|XP_002137117.2| | GA30100, isoform B [Drosophila pseudoobscura pseudoobscura] | 7.9874e-44 |
pfu_aug2.0_787.1_24406.t1 | gi|45553451|ref|NP_996255.1| | ETHR, isoform B [Drosophila melanogaster] | 9.94922e-44 |
Transcript
Transcript ID | pfu_aug2.0_787.1_24406.t1 |
---|---|
Definition | - |
>pfu_aug2.0_787.1_24406.t1 atgaatttgacggctgttaatgaaggaattgatggcgttaaacataacaatgcttcaataaatgtaacaacagacggtgc tccacccaaaacaccgatgtacattcttgtcatcgcagcagtatttttccttctaatattcatagtgggacttatcggga acatttacatcatagctttggtatgtggactgagacacatgaggaccaagatgtgcttactatttatgaaccttagtatc acagacttgttggttgtgatgatatgtatgcccggaactgccgtggacatatttgcgaatgaggcgtggcttctcggtga agcagcttgcatactcgtgtactttctggagagtgtagtaatgttcgcatcagcttcaacagttcttgttataggagtcg acagataccttgcaatatgcaagccaacgactgataacgtttggaaaaaactcaatatagccacaaaaatcaccggaatt tggacaatggcaattctgagctgtgctcccgttgtatttatagcgaaaatccaggaagaaaaaaatgacgacggcacttt agtaaaaacgtgcgacctaatttttgatagaaattggaaaattggttacatgatatcggtgtttattgtattattctctc tggtttttctgatgttgctgtttttgatacaaagaatggcctcaaaacttctccgaccgtctaatttgctcgaaggacaa atcaaaacaaagagaatcagggaacgtagaagagttgtagtcatgctctttttggttgcggtgtgcttcttcgtttgcct ctttccagctcgcgtggtagctatttggtgggtatttgcagaggaaaagctaaccaagaaacttggatgggagggacgta tgcatcgaatttttttcagtcatttgatgatgtatatgaacagtgctctcagtccagtcatttataactcgatgtcaacc aacgtaagagaagtgacggccattttactacgtaaatggtgcaaactctgcaaactcgtctactttctagagaatgtagt aattttcgcatcagctacaacagttcttgttataggtgtcgacagatacctcgcaatatgcaaattaacgactgataacg ctatgaaaagactcaaaatagcaacgaaaatcacgggaatttggacattggcaattttgagttgtgcacccgttggattt atagcgaaattccaggaaaaagaaattgacgacggcactatagtaaaaagatgtgtgctaatttttgatagaaattggaa aattggttacatcatatcggtgttcgttgtattattcagtctaattttggtagtgttgccgtttttgatacatagaatgg cctcaaaacttctccgaccgtctaatttgtttgaaggacaaatcaaaacaaagagaatccgggaacgtagaagagttgtg gtcatgctctgtttggttgcggtgtgcttcttcgtttgtatacttccatctcgtgtggcaatcatttggtttgtatttgg cgaggaaaaactaaccaaggaacttggatgggaaggacgtatgaatcttaaaatttttattcagttgatgatgtatctga acagtgctcttagtccagtcatttataactcgatgtcaaccaacgttagaaaagtgacggccagtttactacgtaaatgg tgcaaattctgtaagaagaaaagaagatataatataggcaatcagaatgaagaaatgacacatagaaatccagacttacc cggcatgcaaagggagtttaatgtagttcaaatatcgattattcaacacaaccaacagtga |
Protein
Protein ID | pfu_aug2.0_787.1_24406.t1 |
---|---|
Definition | - |
>pfu_aug2.0_787.1_24406.t1 MNLTAVNEGIDGVKHNNASINVTTDGAPPKTPMYILVIAAVFFLLIFIVGLIGNIYIIALVCGLRHMRTKMCLLFMNLSI TDLLVVMICMPGTAVDIFANEAWLLGEAACILVYFLESVVMFASASTVLVIGVDRYLAICKPTTDNVWKKLNIATKITGI WTMAILSCAPVVFIAKIQEEKNDDGTLVKTCDLIFDRNWKIGYMISVFIVLFSLVFLMLLFLIQRMASKLLRPSNLLEGQ IKTKRIRERRRVVVMLFLVAVCFFVCLFPARVVAIWWVFAEEKLTKKLGWEGRMHRIFFSHLMMYMNSALSPVIYNSMST NVREVTAILLRKWCKLCKLVYFLENVVIFASATTVLVIGVDRYLAICKLTTDNAMKRLKIATKITGIWTLAILSCAPVGF IAKFQEKEIDDGTIVKRCVLIFDRNWKIGYIISVFVVLFSLILVVLPFLIHRMASKLLRPSNLFEGQIKTKRIRERRRVV VMLCLVAVCFFVCILPSRVAIIWFVFGEEKLTKELGWEGRMNLKIFIQLMMYLNSALSPVIYNSMSTNVRKVTASLLRKW CKFCKKKRRYNIGNQNEEMTHRNPDLPGMQREFNVVQISIIQHNQQ |