Gene
Gene Model ID | pfu_aug2.0_79.1_30152 |
---|---|
Locus | scaffold79.1 : 315685 ... 318549 : + |
To GenomeBrowser | scaffold79.1:315685..318549 |
Genes list of scaffold | scaffold79.1 |
Synonym | pfu_aug1.0_352.1_36513 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_79.1_30152.t1 | 1 | 1 | Actin | 1 | 360 | 0.0 | 519.5 | 0.0 | 0.0 | 519.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_79.1_30152.t1 | gi|383853395|ref|XP_003702208.1| | PREDICTED: actin-5C [Megachile rotundata] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_79.1_30152.t1 |
---|---|
Definition | - |
>pfu_aug2.0_79.1_30152.t1 atgtgcaaggctgggttcgcaggagacgatgcccctcgtgccgtcttcccctccatcgtaggcagacccaggcatcaggg tgtgatggttggtatgggacagaaggacagctatgtaggagacgaggcccagagtaagagaggtatcctcaccctcaaat accccattgaacacggtattgtcacaaactgggacgatatggagaagatctggcatcataccttctacaatgaactccga gtggcccccgaggaacaccctgttctcttgactgaggctccactcaacccaaaggcaaacagagaaaagatgacacagat catgtttgaaaccttcaactctcccgccatgtacgtagctatccaagccgtgctctcactgtacgcttccggtcgtacta caggtatcgtactggactctggggatggggtatcacacacagtaccaatctacgaaggatacgcccttccccacgccatc atgagattagatcttgctggacgtgatctcacagattacctcatgaagatcctcacagagcgtggctactcgttcaccac cacagccgagagagaaatcgtcagagacatcaaagaaaaattgtgttatgttgccttggactttgaacaagaaatggcta ccgccgcgtcatcatcatctttagagaagagttacgaacttcccgacggtcaggtcatcaccattggtaacgaaaggttc agatgtcccgaggctttattccagccatctttcctcggtatggaatctgcaggtatccacgaaacaacatacaacagtat aatgaagtgtgacgtagacattcgtaaagacttgtacgctaacaccgtgttatcaggcggtaccactatgtacccaggta tcgctgaccgtatgcagaaagaaatcacatctcttgctccaagcacaatgaaaatcaaagttatagctccaccagagagg aaatactcagtttggattggtggatctatcctcgcttctctctccaccttccagcagatgtggatcagcaaacaggaata cgacgagtccggtccatccatcgtccacaggaaatgcttctaa |
Protein
Protein ID | pfu_aug2.0_79.1_30152.t1 |
---|---|
Definition | - |
>pfu_aug2.0_79.1_30152.t1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI MRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF RCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKVIAPPER KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF |