Gene
Gene Model ID | pfu_aug2.0_80.1_00190 |
---|---|
Locus | scaffold80.1 : 172323 ... 181891 : + |
To GenomeBrowser | scaffold80.1:172323..181891 |
Genes list of scaffold | scaffold80.1 |
Synonym | pfu_aug1.0_64573.1_56366 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_80.1_00190.t1 | 1 | 1 | UBA_4 | 1 | 38 | 2.2e-10 | 39.8 | 4.0e-14 | 3.0e-10 | 39.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_80.1_00190.t1 | gi|524915389|ref|XP_005112495.1| | PREDICTED: UBA-like domain-containing protein 2-A-like isoform X1 [Aplysia californica] | 2.0e-18 |
pfu_aug2.0_80.1_00190.t1 | gi|241749566|ref|XP_002405834.1| | conserved hypothetical protein [Ixodes scapularis] | 1.0e-11 |
pfu_aug2.0_80.1_00190.t1 | gi|524915391|ref|XP_005112496.1| | PREDICTED: UBA-like domain-containing protein 2-A-like isoform X2 [Aplysia californica] | 2.0e-11 |
pfu_aug2.0_80.1_00190.t1 | gi|755985055|ref|XP_011310722.1| | PREDICTED: UBA-like domain-containing protein 2-A [Fopius arisanus] | 4.0e-11 |
pfu_aug2.0_80.1_00190.t1 | gi|752870559|ref|XP_011252438.1| | PREDICTED: UBA-like domain-containing protein 2 [Camponotus floridanus] | 8.0e-11 |
Transcript
Transcript ID | pfu_aug2.0_80.1_00190.t1 |
---|---|
Definition | - |
>pfu_aug2.0_80.1_00190.t1 atgatcaatcattttgtatcagctacgggcgttcatacagatcaagcgaaacaattgttggcagcttcaaattggcagtt tcagacggcactcagtatgtttttacaagattccgccattccttcaggtacaagaccttgcaatgttccaggtgcaaatc acacaaatgcaaattatgcattttgtgctccagcaaatacgntaagtataagagagatgaattga |
Protein
Protein ID | pfu_aug2.0_80.1_00190.t1 |
---|---|
Definition | - |
>pfu_aug2.0_80.1_00190.t1 MINHFVSATGVHTDQAKQLLAASNWQFQTALSMFLQDSAIPSGTRPCNVPGANHTNANYAFCAPANTXSIREMN |