Gene
Gene Model ID | pfu_aug2.0_8102.1_09652 |
---|---|
Locus | scaffold8102.1 : 1 ... 11508 : + |
To GenomeBrowser | scaffold8102.1:1..11508 |
Genes list of scaffold | scaffold8102.1 |
Synonym | pfu_aug1.0_8418.1_67855 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_8102.1_09652.t1 | 1 | 1 | FtsJ | 1 | 89 | 8.4e-16 | 58.4 | 2.2e-19 | 1.6e-15 | 57.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_8102.1_09652.t1 | gi|260787461|ref|XP_002588771.1| | hypothetical protein BRAFLDRAFT_125627 [Branchiostoma floridae] | 0.0 |
pfu_aug2.0_8102.1_09652.t1 | gi|573907610|ref|XP_006641524.1| | PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like [Lepisosteus oculatus] | 0.0 |
pfu_aug2.0_8102.1_09652.t1 | gi|742168089|ref|XP_010849199.1| | PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 [Bison bison bison] | 0.0 |
pfu_aug2.0_8102.1_09652.t1 | gi|555975227|ref|XP_005899597.1| | PREDICTED: ftsJ methyltransferase domain-containing protein 1 [Bos mutus] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_8102.1_09652.t1 |
---|---|
Definition | - |
>pfu_aug2.0_8102.1_09652.t1 gtgacagcagatggttctatagactgtcaggacgacccggcagagcaggaattagtcgtgtcccgtctacacgtctgcga ggctctcaccaccatgtcaatccttgctcccgggggacacatggtccttaaaaagttcactatgtttgagtgtgatacaa tttgtctcatgtacatattaaactgtatgttctcagaggtccacgtgataaaaccagcaagcagtaagagtggtaactct gaggtttacattgtatgtaaggagttccttgcccctgacggacacaaactgctgatcgataggatgtgtgagatgtactt cgactcagattcaaacttgtctacaccattgaaatgtatgtttgccatcgatcaaattcctgagtcattcctacacaagc atatcaacatctgtacgttattcaccaatctacagggagagacaatccagaataaccttgaccattacccggtcctctcg gacaagtaccgagcatggattgaaagtgtcaaggagtattgtgcagagttctattttaatctatacaatgtacggccagt acctgaccattgtcgagtggtaccgttccggacacagaaaaagataaagaaattaaatggattcagtacaagaggcagca aatttagagataagaaaagaagaaatgggacatttaatgacagacaaatggttgcacggttaccatggaaacaaagaata caacaaatggagaaattagagatttctccaatacaccctgtatggtttaag |
Protein
Protein ID | pfu_aug2.0_8102.1_09652.t1 |
---|---|
Definition | - |
>pfu_aug2.0_8102.1_09652.t1 VTADGSIDCQDDPAEQELVVSRLHVCEALTTMSILAPGGHMVLKKFTMFECDTICLMYILNCMFSEVHVIKPASSKSGNS EVYIVCKEFLAPDGHKLLIDRMCEMYFDSDSNLSTPLKCMFAIDQIPESFLHKHINICTLFTNLQGETIQNNLDHYPVLS DKYRAWIESVKEYCAEFYFNLYNVRPVPDHCRVVPFRTQKKIKKLNGFSTRGSKFRDKKRRNGTFNDRQMVARLPWKQRI QQMEKLEISPIHPVWFK |