Gene
Gene Model ID | pfu_aug2.0_812.1_07919 |
---|---|
Locus | scaffold812.1 : 158588 ... 164525 : - |
To GenomeBrowser | scaffold812.1:158588..164525 |
Genes list of scaffold | scaffold812.1 |
Synonym | pfu_aug1.0_92736.1_06184 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_812.1_07919.t1 | 1 | 1 | RWD | 23 | 147 | 3.8e-15 | 55.7 | 8.3e-19 | 6.1e-15 | 55.0 |
pfu_aug2.0_812.1_07919.t1 | 2 | 1 | DUF1115 | 141 | 159 | 2.0e-20 | 72.7 | 0.6 | 4400.0 | -2.8 |
pfu_aug2.0_812.1_07919.t1 | 2 | 2 | DUF1115 | 178 | 266 | 2.0e-20 | 72.7 | 3.0e-24 | 2.2e-20 | 72.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_812.1_07919.t1 | gi|676476766|ref|XP_009060899.1| | hypothetical protein LOTGIDRAFT_165633 [Lottia gigantea] | 0.0 |
pfu_aug2.0_812.1_07919.t1 | gi|524867944|ref|XP_005090779.1| | PREDICTED: RWD domain-containing protein 2B-like isoform X1 [Aplysia californica] | 0.0 |
pfu_aug2.0_812.1_07919.t1 | gi|291226854|ref|XP_002733405.1| | PREDICTED: RWD domain-containing protein 2B-like [Saccoglossus kowalevskii] | 0.0 |
pfu_aug2.0_812.1_07919.t1 | gi|514455947|ref|XP_005002550.1| | PREDICTED: RWD domain-containing protein 2B isoform X2 [Cavia porcellus] | 0.0 |
pfu_aug2.0_812.1_07919.t1 | gi|260837185|ref|XP_002613586.1| | hypothetical protein BRAFLDRAFT_208312 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_812.1_07919.t1 |
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Definition | - |
>pfu_aug2.0_812.1_07919.t1 atgaatgcggggatagattatgaaggtgatgatacggaggacagcacgtcagaaaatgttgccgagttgttggagttaca gctgtcagagatagagatgctatcaagtatgttcccaaacaaaggagaatttgtcatagacgaccctgctggagttaaaa atgtacaggaattccttaaaggcagcatcaagtatgagtatctacacagtagactgggatttactatacatgtctcacca gaaggaactaagctgtctgtagaattggtgtgtaactttccacatgattaccctaatgtatcgcctaccgtctttacacg ctgtcctctcatgtcacgggaaaatcataaacgtctacaagaggacctgcatcagtacattcaaagtctggatcgtggtg agatctgtatgtattcagtggtggagtggatccaggaacacgtagaaaactatacacaggaggaagacattcaaagtcca gtagaaaaaaagcagaaaagggaggaagacggaactttgacacgtttgtggatatacagtcatcatatttatagtaaatt caaaagaagagatattcttgattgggcaggagaattaaaattgacaggttttagtttgccgggaaaacctggcattatct gtgccgagggatatagtcgtaatgtagacgaatattggcacagacttaggaacttaaactggaaacgtctttgtgttaaa gaaaaagaggacaaagaaataggagatgatgatatttctaaacacagaaagtttcccgattttgaggagaaagtttttnt gttaaataatttttttcaaagtgtacaataa |
Protein
Protein ID | pfu_aug2.0_812.1_07919.t1 |
---|---|
Definition | - |
>pfu_aug2.0_812.1_07919.t1 MNAGIDYEGDDTEDSTSENVAELLELQLSEIEMLSSMFPNKGEFVIDDPAGVKNVQEFLKGSIKYEYLHSRLGFTIHVSP EGTKLSVELVCNFPHDYPNVSPTVFTRCPLMSRENHKRLQEDLHQYIQSLDRGEICMYSVVEWIQEHVENYTQEEDIQSP VEKKQKREEDGTLTRLWIYSHHIYSKFKRRDILDWAGELKLTGFSLPGKPGIICAEGYSRNVDEYWHRLRNLNWKRLCVK EKEDKEIGDDDISKHRKFPDFEEKVFXLNNFFQSVQ |