Gene
Gene Model ID | pfu_aug2.0_812.1_07922 |
---|---|
Locus | scaffold812.1 : 184569 ... 197364 : + |
To GenomeBrowser | scaffold812.1:184569..197364 |
Genes list of scaffold | scaffold812.1 |
Synonym | pfu_aug1.0_222.1_50726 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_812.1_07922.t1 | 2 | 1 | Beta_helix | 250 | 371 | 3.3e-08 | 33.4 | 5.5e-06 | 0.081 | 12.6 |
pfu_aug2.0_812.1_07922.t1 | 2 | 2 | Beta_helix | 410 | 537 | 3.3e-08 | 33.4 | 3.5e-10 | 5.1e-06 | 26.3 |
Transcript
Transcript ID | pfu_aug2.0_812.1_07922.t1 |
---|---|
Definition | - |
>pfu_aug2.0_812.1_07922.t1 atgactgtggttcccggtttttccctgcttagtttcgtctcttgtctcctgttgattggtgtagtcgagtcgtttctatt tgatacagacgccaacctgtatgtcagtccccagggatcagattccaacaatgggaaagacgaacaccatccattcaaaa ccttggccaaagctgtagctgtagtaaaagaacccgcctacataaaccaagatgttgttattaacacgatggcgggttac catgatttggcgtccacgttgaagataaataacagaccaccaaggaatgcccgtcatcgtaaaatcaccatacaggcata caataaccaagaagtccacattactggaggaaaaagaatacccagcaacttgtttcagcgcgtcagggatcaaaacatac tcaacagactaatgccagaacccagatctaaggtcgttcagatgaaattgtcagacgctggtatccatgaccttggccaa atgcatccctatggcaacgaggtcaccagaatagctccgctagaaatattctataatggagaaccactagttctggcaca ctggccgaactggtctatggtaaatattatatcaacacctgatggaagaaacggaaaaagatttacatatgctggagaca gaccaaaaaggtggtccaaggaaacagacatgtgggcttatggattctggtatcatacatgggctgaccttgcaatcaaa attacaagtattgatacagcaacccatacaataacactgaacaacacggaacgccacggcatgcaaccaggacactatcc taattcatcaacgatacaaggtggttacttcagagtggtcaatgttctgtctgaactggacatgcctggggaattttacg tggacagaactagtggtattctgtatatgtggccaccgacaaacaacgcccatatatccggaaatgacgtcatatatgca tcaataatcaatgactgcatcaatattgattcctattcgtcgaacatagagttccgagggattactatcgaagactgtag aaaacaaggaataattacaggaaacgtggaaaatcttacactaactgaaatggaaataaaaaataccggtggagaccgtg ataccttgaccccctccgggtctgagatagccgacaacatattttggcgatacagtagggtgacgggtgtagggaaggac gctgtcaacataccgtggggcgtggggttacatgtccaccacaaccatatatataatggacaatacaacggcgtcctgtg gacgggaaatgaccatctgattgagtataacaatattcacaatgtgtgtatcaacgccacggactgtggtgctatccatg tgaccagggactggacttgtagagggaacattttacgtcataaccacattcaccatgtcaataagctgattcctggagcg gattgtaggggtgtgatgatagacgatcagtactcaggactattggtggaacataatgtcttttatcagaataacgtaca tataaacattgccggtgggcggaacaacatcgcacgttacaacatattctataacgcctcatcacacgttctacaagtgg atactcgaggaacacgtcacagaaatgacgtcagtctgtacggtaaactacataggtataacgaatctatccaacataat ggaatctgggcaaagaggtatcctgaactgacaacgttactgtcaaaccacccagaactaccaatggggaacaagttatt caggaacataatctaccatactacgggtcaggagatcaaaggggacgacggacgccacccagaatggttcaacatctcaa gcaatgcccacgctgttggtccgaccgacttctattcaccatcagcagctgatttcagaccaaggtgttcattgtcacag tttgttcagggcacaaaattccctcgcccaccctcaattgacgaagtgggtcctagatatcctgttggaccccagcatgt acgcgcaagttgctggttcaaatttgacaaatgccctaaccacccggagttagagaccacgtgtacaggacctaactgta cgttagtgagggacagcgtgggggagcgggaccataacgctggtaccaacgccacggcatgtatggagagggtgtcacat tactaccaatggtgtgggggtgacgcctcctcgtttgaagctatatatggaccaacaggcgagtggacgtcgggtgggca tggctgttggatgggagaatacggctctgtcactcgtcctaagaacggttccttccaccgagacgcgtgggcagaggggc ggggttacgggcacaatgagacaatgtgcttaggtcgggcaacttatacatacattgtgtatagccattacaacagtgac tacccggtcatcagtatctacaggcctaacggtcacaaggtaattacaggagggggatgttggataaagacagagaggtg tagcaaggattcctccatcaagccgtaccagatcttctatgatgcctggggtgccgctaacgctgatacaggttctgtta aaatttacacaggttgtatctga |
Protein
Protein ID | pfu_aug2.0_812.1_07922.t1 |
---|---|
Definition | - |
>pfu_aug2.0_812.1_07922.t1 MTVVPGFSLLSFVSCLLLIGVVESFLFDTDANLYVSPQGSDSNNGKDEHHPFKTLAKAVAVVKEPAYINQDVVINTMAGY HDLASTLKINNRPPRNARHRKITIQAYNNQEVHITGGKRIPSNLFQRVRDQNILNRLMPEPRSKVVQMKLSDAGIHDLGQ MHPYGNEVTRIAPLEIFYNGEPLVLAHWPNWSMVNIISTPDGRNGKRFTYAGDRPKRWSKETDMWAYGFWYHTWADLAIK ITSIDTATHTITLNNTERHGMQPGHYPNSSTIQGGYFRVVNVLSELDMPGEFYVDRTSGILYMWPPTNNAHISGNDVIYA SIINDCINIDSYSSNIEFRGITIEDCRKQGIITGNVENLTLTEMEIKNTGGDRDTLTPSGSEIADNIFWRYSRVTGVGKD AVNIPWGVGLHVHHNHIYNGQYNGVLWTGNDHLIEYNNIHNVCINATDCGAIHVTRDWTCRGNILRHNHIHHVNKLIPGA DCRGVMIDDQYSGLLVEHNVFYQNNVHINIAGGRNNIARYNIFYNASSHVLQVDTRGTRHRNDVSLYGKLHRYNESIQHN GIWAKRYPELTTLLSNHPELPMGNKLFRNIIYHTTGQEIKGDDGRHPEWFNISSNAHAVGPTDFYSPSAADFRPRCSLSQ FVQGTKFPRPPSIDEVGPRYPVGPQHVRASCWFKFDKCPNHPELETTCTGPNCTLVRDSVGERDHNAGTNATACMERVSH YYQWCGGDASSFEAIYGPTGEWTSGGHGCWMGEYGSVTRPKNGSFHRDAWAEGRGYGHNETMCLGRATYTYIVYSHYNSD YPVISIYRPNGHKVITGGGCWIKTERCSKDSSIKPYQIFYDAWGAANADTGSVKIYTGCI |