Gene
Gene Model ID | pfu_aug2.0_863.1_11253 |
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Locus | scaffold863.1 : 113147 ... 115085 : - |
To GenomeBrowser | scaffold863.1:113147..115085 |
Genes list of scaffold | scaffold863.1 |
Synonym | pfu_aug1.0_3.1_00041 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_863.1_11253.t1 | 2 | 1 | Tyrosinase | 68 | 121 | 3.2e-17 | 63.4 | 7.9e-21 | 5.8e-17 | 62.5 |
pfu_aug2.0_863.1_11253.t1 | 2 | 2 | Tyrosinase | 168 | 190 | 3.2e-17 | 63.4 | 0.77 | 5700.0 | -2.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_863.1_11253.t1 | gi|339259206|ref|XP_003369789.1| | putative PAN domain protein [Trichinella spiralis] | 2.0e-23 |
Transcript
Transcript ID | pfu_aug2.0_863.1_11253.t1 |
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Definition | - |
>pfu_aug2.0_863.1_11253.t1 atggaggacgctacaatctcgattctttggacaccaagctttttcgggaatgcttttaacgaagtagagcgaggtccatt tggtcactggacgacgcccgatggtcaaagactgcgaagaaacataggtttcctgggttcacttatacgtagatcggata tagaagggatgatagtaaatgcaagaaaccattcggacgtcgtgcgatccggatttgattctgtcacattttctgagtcg actatagaagctgaacatgataatgtccatgcatgggtaggagggacaatgagtggtttattaactgcagcatttgaccc attattctttcttcaccattgtttcatagatttaatttgggaaaaattgcgtgagggtttgcgccaaaagaacgtggatc cggaatccgactatcctgacacgataggtgaccaagcggcgggtagtcctatgtacttatttgactttcttagaaatatt gacggctattctgatagatggactaggcaattttaccaatacgacaatcagccaagttgttctggaggaacccaaggatg ttcgtcagaatatttaagatgtgccccaactagatctcagccagaaaatgttatgtgtacttccttgacctctaactacg tgctggatgtttcaccaagagtccgctacaaatctgcaatccttgatatcgagactacggttggtccaagattcacgagt tccacaaataagcatgttgctggtctttttaaacttatttcacctacttcacctctttcaagatctgagatcagtaaact ggcattttcgattctgaaaacgccgaatatatttaattccatatctgaaaaaatgaaacaacaactcatcatacgaatgt tttcgatgggtctataa |
Protein
Protein ID | pfu_aug2.0_863.1_11253.t1 |
---|---|
Definition | - |
>pfu_aug2.0_863.1_11253.t1 MEDATISILWTPSFFGNAFNEVERGPFGHWTTPDGQRLRRNIGFLGSLIRRSDIEGMIVNARNHSDVVRSGFDSVTFSES TIEAEHDNVHAWVGGTMSGLLTAAFDPLFFLHHCFIDLIWEKLREGLRQKNVDPESDYPDTIGDQAAGSPMYLFDFLRNI DGYSDRWTRQFYQYDNQPSCSGGTQGCSSEYLRCAPTRSQPENVMCTSLTSNYVLDVSPRVRYKSAILDIETTVGPRFTS STNKHVAGLFKLISPTSPLSRSEISKLAFSILKTPNIFNSISEKMKQQLIIRMFSMGL |