Gene
Gene Model ID | pfu_aug2.0_91.1_03597 |
---|---|
Locus | scaffold91.1 : 458552 ... 475013 : - |
To GenomeBrowser | scaffold91.1:458552..475013 |
Genes list of scaffold | scaffold91.1 |
Synonym | pfu_aug1.0_26089.1_40609 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
60s ribosomal protein l7 l12 | GO:0030529 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_91.1_03597.t1 | 2 | 1 | Ribosomal_L12 | 62 | 85 | 4.7e-20 | 71.3 | 0.26 | 760.0 | 0.2 |
pfu_aug2.0_91.1_03597.t1 | 2 | 2 | Ribosomal_L12 | 120 | 187 | 4.7e-20 | 71.3 | 1.6e-23 | 4.7e-20 | 71.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_91.1_03597.t1 | gi|676428777|ref|XP_009045385.1| | hypothetical protein LOTGIDRAFT_156500 [Lottia gigantea] | 0.0 |
pfu_aug2.0_91.1_03597.t1 | gi|524872452|ref|XP_005092988.1| | PREDICTED: 39S ribosomal protein L12, mitochondrial-like [Aplysia californica] | 1.96182e-44 |
pfu_aug2.0_91.1_03597.t1 | gi|675846838|ref|XP_009008979.1| | hypothetical protein HELRODRAFT_63014 [Helobdella robusta] | 3.9937e-43 |
pfu_aug2.0_91.1_03597.t1 | gi|688544714|ref|XP_009298024.1| | PREDICTED: 39S ribosomal protein L12, mitochondrial isoform X1 [Danio rerio] | 5.99756e-43 |
pfu_aug2.0_91.1_03597.t1 | gi|665820530|ref|XP_008559170.1| | PREDICTED: 39S ribosomal protein L12, mitochondrial [Microplitis demolitor] | 8.99634e-43 |
Transcript
Transcript ID | pfu_aug2.0_91.1_03597.t1 |
---|---|
Definition | - |
>pfu_aug2.0_91.1_03597.t1 atgacccctatggatttatgggtccaaaggtcaagattaaagcgacaagaacggttagctgaaacttgcagttgtggact gtctatacgtaggaggtatggcagcgaggcagggacagcagatatacctcctccacatattgagggtacagacaaagaat attccccaaagatccataatattgtggatgaaatcagcaagttgacgctggtagaagtatgtgacttgaatgagttacta aagaaaactctaaaaatccaagatgcccctgttatggcaatgtctgcaggtgctgtagctgctgcacccaaggaggaaga ggaagaagaggtggcacctgttattacaaagacctcgtttactgtcaaactcactgcatttgatgctgagaagaaaattg cgctaattaaagaactcaaaaatattatacctgatatgaatttagttcaggctaaaaaatttgtagaatccgtacctcaa gttgttaaagatgacctagctaaggacgaagcagataacttaaaaaagaaactagaagaacttggtggtaaagcagaagt agagtga |
Protein
Protein ID | pfu_aug2.0_91.1_03597.t1 |
---|---|
Definition | - |
>pfu_aug2.0_91.1_03597.t1 MTPMDLWVQRSRLKRQERLAETCSCGLSIRRRYGSEAGTADIPPPHIEGTDKEYSPKIHNIVDEISKLTLVEVCDLNELL KKTLKIQDAPVMAMSAGAVAAAPKEEEEEEVAPVITKTSFTVKLTAFDAEKKIALIKELKNIIPDMNLVQAKKFVESVPQ VVKDDLAKDEADNLKKKLEELGGKAEVE |