Gene
Gene Model ID | pfu_aug2.0_996.1_21324 |
---|---|
Locus | scaffold996.1 : 32970 ... 34815 : - |
To GenomeBrowser | scaffold996.1:32970..34815 |
Genes list of scaffold | scaffold996.1 |
Synonym | pfu_aug1.0_994.1_43873 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_996.1_21324.t1 | 2 | 1 | C1q | 132 | 142 | 2.5e-17 | 63.0 | 4.0 | 3100.0 | -1.9 |
pfu_aug2.0_996.1_21324.t1 | 2 | 2 | C1q | 178 | 301 | 2.5e-17 | 63.0 | 5.3e-20 | 4.1e-17 | 62.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_996.1_21324.t1 | gi|742201067|ref|XP_010893484.1| | PREDICTED: uncharacterized protein LOC105024896 [Esox lucius] | 1.0e-14 |
Transcript
Transcript ID | pfu_aug2.0_996.1_21324.t1 |
---|---|
Definition | - |
>pfu_aug2.0_996.1_21324.t1 atgaggacaattcaagtatggtctatcctaagtttgatggcgtggacatcaggattactacaccctgctaccactggtcc aactctggaacaaaagtttgccagccttgagatggaaattagacataacttgtccaacttacaacaacaggtctttgcat cggaaactttagctttgcgtcaaatcctgaatcaagagagagaattcagaaaagagatggaacaagaagtaaaggaacta aaaagaaatcaaacattcatagagggaaacctgagcaaggagattcagaacttgacccagaagatgaatgctatggaaac aaaactggatattgtcatcgggaaacagaatcaaatgggtatcacacttaacaaccatgtcagcaatgagagttacttca tgacgtcaacgtctcaaaaataccaacatctctcgtccgtagttactgacactcaacaagaaataactaaagtgaaatct gcaattcataatcttccccatagcaccaccactggacaaggcaacgtggtagcgttcactgcagtttcctcttcgtcgaa ggactatggaagtgaaaagatagtgtttgatcgtgttatcacaaatgttggcagtgcctacaacggtgtatctggcgtct tcacaagcccgacagagggagtatacatctttacatggactcatctgacatattctggacactattgccatgcttatctg aatagaaatggtaacaggataagtctagacgctcacagcaatctgttaggaacatccgggaccgtatatacaatggctac catgtcaggtaccctaagtctaagtgcaggtgatcaagtctggatccaagcaagtcattgtccaccttttaatggctctc cttataattccttttctggatggaaactttag |
Protein
Protein ID | pfu_aug2.0_996.1_21324.t1 |
---|---|
Definition | - |
>pfu_aug2.0_996.1_21324.t1 MRTIQVWSILSLMAWTSGLLHPATTGPTLEQKFASLEMEIRHNLSNLQQQVFASETLALRQILNQEREFRKEMEQEVKEL KRNQTFIEGNLSKEIQNLTQKMNAMETKLDIVIGKQNQMGITLNNHVSNESYFMTSTSQKYQHLSSVVTDTQQEITKVKS AIHNLPHSTTTGQGNVVAFTAVSSSSKDYGSEKIVFDRVITNVGSAYNGVSGVFTSPTEGVYIFTWTHLTYSGHYCHAYL NRNGNRISLDAHSNLLGTSGTVYTMATMSGTLSLSAGDQVWIQASHCPPFNGSPYNSFSGWKL |